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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2677001 chr6:58642502 T/C GUSBL2 chr6:58246159-58287724:- 0.66 5.21 3.27E-6 Box Plot
ACC rs2687972 chr4:39453668 A/G RPL9 chr4:39455744-39460568:- 0.73 5.91 2.64E-7 Box Plot
ACC rs2693066 chr6:58671330 C/T GUSBL2 chr6:58246159-58287724:- 0.67 5.48 1.26E-6 Box Plot
ACC rs2693068 chr6:58668189 T/C GUSBL2 chr6:58246159-58287724:- 0.67 5.47 1.31E-6 Box Plot
ACC rs2694618 chr2:61536984 A/G C2orf74 chr2:61372203-61391964:+ 0.56 5.6 8.29E-7 Box Plot
ACC rs2694624 chr2:61672313 C/A C2orf74 chr2:61372203-61391964:+ 0.61 5.55 9.79E-7 Box Plot
ACC rs2694635 chr2:61676940 C/T C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2694636 chr2:61677137 C/G C2orf74 chr2:61372203-61391964:+ 0.6 5.73 5.18E-7 Box Plot
ACC rs2694643 chr2:61604383 A/G C2orf74 chr2:61372203-61391964:+ 0.53 5.38 1.79E-6 Box Plot
ACC rs2694900 chr20:45139289 T/C LOC100240726 chr20:45092301-45093931:- 0.73 6.67 1.64E-8 Box Plot
ACC rs2722666 chr19:44911639 A/G XRCC1 chr19:44047192-44084625:- 0.84 5.2 3.36E-6 Box Plot
ACC rs2722666 chr19:44911639 A/G ZNF45 chr19:44416781-44439430:- 0.88 5.18 3.7E-6 Box Plot
ACC rs27290 chr5:96350088 A/G ERAP2 chr5:96211643-96255420:+ 0.91 11.38 1.0E-15 Box Plot
ACC rs27300 chr5:96363407 A/G ERAP2 chr5:96211643-96255420:+ 0.99 10.25 4.39E-14 Box Plot
ACC rs27307 chr5:96338505 C/G ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot